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Hydrocarbon and Lipid Microbiology Protocols: Synthetic and Systems Biology - Applications, McGenity Terry J., Timmis Kenneth N., Nogales Fernбndez Balbina


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Автор: McGenity Terry J., Timmis Kenneth N., Nogales Fernбndez Balbina
Название:  Hydrocarbon and Lipid Microbiology Protocols: Synthetic and Systems Biology - Applications
ISBN: 9783662569818
Издательство: Springer
Классификация:

ISBN-10: 3662569817
Обложка/Формат: Paperback
Страницы: 137
Вес: 0.27 кг.
Дата издания: 15.06.2018
Серия: Springer protocols handbooks
Язык: English
Издание: Softcover reprint of
Иллюстрации: 20 illustrations, color; 20 illustrations, black and white; x, 137 p. 40 illus., 20 illus. in color.
Размер: 25.40 x 17.78 x 0.81 cm
Читательская аудитория: Professional & vocational
Подзаголовок: Synthetic and systems biology - applications
Ссылка на Издательство: Link
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Поставляется из: Германии
Описание: This Volume presents protocols for systems and synthetic biology applications in the field of hydrocarbon and lipid microbiology.

Hydrocarbon and Lipid Microbiology Protocols: Synthetic and Systems Biology - Tools

Автор: McGenity Terry J., Timmis Kenneth N., Nogales Balbina
Название: Hydrocarbon and Lipid Microbiology Protocols: Synthetic and Systems Biology - Tools
ISBN: 3662570580 ISBN-13(EAN): 9783662570586
Издательство: Springer
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Цена: 93160.00 T
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Описание: This Volume presents generic protocols for wet experimental and computer-based systems and synthetic biology approaches relevant to the field of hydrocarbon and lipid microbiology.

Hydrocarbon and Lipid Microbiology Protocols: Pollution Mitigation and Waste Treatment Applications

Автор: McGenity Terry J., Timmis Kenneth N., Nogales Balbina
Название: Hydrocarbon and Lipid Microbiology Protocols: Pollution Mitigation and Waste Treatment Applications
ISBN: 3662571137 ISBN-13(EAN): 9783662571132
Издательство: Springer
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Цена: 93160.00 T
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Описание: This Volume presents applications of hydrocarbon microbiology in the context of environmental pollutant degradation, covering pollutants such as petroleum and related wastes (i.e.

Hydrocarbon and Lipid Microbiology Protocols: Isolation and Cultivation

Автор: McGenity Terry J., Timmis Kenneth N., Nogales Balbina
Название: Hydrocarbon and Lipid Microbiology Protocols: Isolation and Cultivation
ISBN: 3662568780 ISBN-13(EAN): 9783662568781
Издательство: Springer
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Описание: Introduction to the cultivation of microbes involved in the cycling of hydrocarbons.- Cultivating fastidious microbes.- The essentials of cultivating aerobic hydrocarbon-degrading microbes.- Cultivating aerobic hydrocarbon-degrading microbes from microalgae.- Growing and maintaining hydrocarbon-degrading consortia.- Two-phase cultivation techniques for hydrocarbon-degrading organisms.- Cultivation of hydrocarbon-degrading fungi.- Growth of hydrocarbon-degrading bacteria in continuous culture.- Growth procedures at low substrate concentrations.- Cultivation of biofilm-forming hydrocarbon degraders.- Cultivation of asphaltene-degrading microbes.- Cultivation of microorganisms for fuel quality improvement.- Simulation of oxygen and redox oscillations in crude oil- degrading bioreactors.- Cultivation of anaerobic microorganisms with hydrocarbons as growth substrates.- Enrichment and isolation of metal respirers and hydrocarbon oxidizers.- Enrichment and isolation of oxyion-respiring hydrocarbon oxidizers.- Cultivation of methanogens.- Cultivation of methylotrophs.- Cultivation of methanotrophs.- Cultivation of extremophilic hydrocarbon degraders.- Cultivation of piezophilic hydrocarbon degraders.- Cultivation of oil-producing microalgae.- Cultivation of oleaginous yeasts.- Cultivation of oil-tolerant protists.

Hydrocarbon and Lipid Microbiology Protocols: Single-Cell and Single-Molecule Methods

Автор: McGenity Terry J., Timmis Kenneth N., Nogales Balbina
Название: Hydrocarbon and Lipid Microbiology Protocols: Single-Cell and Single-Molecule Methods
ISBN: 3662569825 ISBN-13(EAN): 9783662569825
Издательство: Springer
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Описание: Introduction: Single cell biotechnology for uncultured microorganisms.- Single-cell cultivation in microfluidic devices.- Single-cell bacterial bioreporter assays to measure hydrocarbons.- Whole genome amplification of single bacterial cells.- Detection of specific mRNA molecules in hydrocarbon-degrading bacteria.- Localisation of proteins within intact bacterial cells using fluorescent protein fusions.- Raman-FISH.- Single-cell metabolomics.- Marrying single molecules to single cells: Protocols for the study of the bacterial proto-ring components essential for division.- Single cell biotechnology for uncultured microorganisms.- Single cell and systems biology tools for biofuel production.- Detection of protein-synthesizing microorganisms in the environment via bioorthogonal non-canonical amino acid tagging (BONCAT).- Flow cytometric determination of microbial abundances and its use to obtain indices of community structure and relative activity.- Protocols for visualizing horizontal gene transfer in Gram-negative bacteria through natural competence.

Hydrocarbon and Lipid Microbiology Protocols: Activities and Phenotypes

Автор: McGenity Terry J., Timmis Kenneth N., Nogales Balbina
Название: Hydrocarbon and Lipid Microbiology Protocols: Activities and Phenotypes
ISBN: 366256985X ISBN-13(EAN): 9783662569856
Издательство: Springer
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Описание: Introduction.- Protocols for the measurement of bacterial chemotaxis to hydrocarbons.- Determining the tendency of microorganisms to interact with hydrocarbon phases.- Protocols for measuring biosurfactant production in microbial cultures.- Protocol for the measurement of hydrocarbon transport in bacteria.- Bacterial solvent response and tolerance: cis-trans isomerization.- Analysis of PHB metabolism applying Tn5 mutagenesis in Ralstonia eutropha.- Phenotyping microarrays for the characterization of environmental microorganisms.- Control of the concentration of aquatic hydrocarbons by microorganisms.- Protocols for measuring methanogenesis.- Respiration rate determined by phosphorescence-based sensors.- Measuring the impact of hydrocarbons on rates of nitrogen fixation.- Protocols for measuring activity of sulphate-reducing bacteria in water injection systems.- Protocol for evaluating the biological stability of fuel formulations and their relationship to carbon steel biocorrosion.- Laboratory protocols for investigating microbial souring and potential treatments in crude oil reservoirs.


Hydrocarbon and Lipid Microbiology Protocols

Автор: Terry J. McGenity; Kenneth N. Timmis; Balbina Noga
Название: Hydrocarbon and Lipid Microbiology Protocols
ISBN: 3662504499 ISBN-13(EAN): 9783662504499
Издательство: Springer
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Цена: 130430.00 T
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Описание: This Volume presents protocols for investigating the genetic, metabolic and ecological potential and functional analysis of microbial communities.

Hydrocarbon and Lipid Microbiology Protocols

Автор: Terry J. McGenity; Kenneth N. Timmis; Balbina Noga
Название: Hydrocarbon and Lipid Microbiology Protocols
ISBN: 366252791X ISBN-13(EAN): 9783662527917
Издательство: Springer
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Цена: 139750.00 T
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Описание: Hydrocarbon and Lipid Microbiology ProtocolsThere are tens of thousands of structurally different hydrocarbons, hydrocarbon derivatives and lipids, and a wide array of these molecules are required for cells to function.

Hydrocarbon and Lipid Microbiology Protocols

Автор: Terry J. McGenity; Kenneth N. Timmis; Balbina Noga
Название: Hydrocarbon and Lipid Microbiology Protocols
ISBN: 3662491389 ISBN-13(EAN): 9783662491386
Издательство: Springer
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Цена: 121110.00 T
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Описание:

This Volume features protocols for investigating the hydrocarbon- and lipid-specific activities of microbes. They include methods for studying chemotaxis, the colonisation of hydrocarbon surfaces, hydrocarbon uptake, respiration, nitrogen fixation, sulphate reduction, membrane stabilisation through cis-trans isomerisation of membrane fatty acids, and the production of biosurfactants and biopolymers in response to the presence of hydrocarbons. A protocol for studying the ability of microbes to control the concentration of hydrocarbons in their aqueous environment is also described, and phenotyping methods to reveal microbes’ more general metabolic activities are presented. Several protocols for investigating acid production in connection with oil souring and biocorrosion by microbes in oil well, oil transportation and storage settings are presented. Lastly, protocols for measuring methanogenesis, as an example of microbial hydrocarbon production, are described.<
Hydrocarbon and Lipid Microbiology Protocols
There are tens of thousands of structurally different hydrocarbons, hydrocarbon derivatives and lipids, and a wide array of these molecules are required for cells to function. The global hydrocarbon cycle, which is largely driven by microorganisms, has a major impact on our environment and climate. Microbes are responsible for cleaning up the environmental pollution caused by the exploitation of hydrocarbon reservoirs and will also be pivotal in reducing our reliance on fossil fuels by providing biofuels, plastics and industrial chemicals. Gaining an understanding of the relevant functions of the wide range of microbes that produce, consume and modify hydrocarbons and related compounds will be key to responding to these challenges. This comprehensive collection of current and emerging protocols will facilitate acquisition of this understanding and exploitation of useful activities of such microbes.

Hydrocarbon and Lipid Microbiology Protocols

Автор: Terry J. McGenity; Kenneth N. Timmis; Balbina Noga
Название: Hydrocarbon and Lipid Microbiology Protocols
ISBN: 3662531135 ISBN-13(EAN): 9783662531136
Издательство: Springer
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Цена: 121110.00 T
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Описание: This Volume covers protocols for various applications in hydrocarbon microbiology, including those of interest for industrial processes, biocatalysis, lipid and biofuel production, bioproducts, or the human microbiome. It presents detailed protocols for the functional screening of enzymes acting on greasy molecules (i.e. lipases, esterases), including assays for enantioselective biocatalysts, as well as approaches for protein display technologies. Protocols for improving fuel quality and production of biofuel and lipids in different hosts (bacteria, algae, yeast) are also provided. The production of biogas from organic waste and its fermentation into value-added products such as polyhydroxyalkanoates is covered, as well as an in-vitro model of the gut microbiome for short-chain fatty acid metabolism and microbial diversity analyses. The applications presented are examples of the many potential applications in hydrocarbon and lipid microbiology, and many (i.e. protein-display technologies) will also be of interest in other research fields. Hydrocarbon and Lipid Microbiology ProtocolsThere are tens of thousands of structurally different hydrocarbons, hydrocarbon derivatives and lipids, and a wide array of these molecules are required for cells to function. The global hydrocarbon cycle, which is largely driven by microorganisms, has a major impact on our environment and climate. Microbes are responsible for cleaning up the environmental pollution caused by the exploitation of hydrocarbon reservoirs and will also be pivotal in reducing our reliance on fossil fuels by providing biofuels, plastics and industrial chemicals. Gaining an understanding of the relevant functions of the wide range of microbes that produce, consume and modify hydrocarbons and related compounds will be key to responding to these challenges. This comprehensive collection of current and emerging protocols will facilitate acquisition of this understanding and exploitation of useful activities of such microbes.

Hydrocarbon and Lipid Microbiology Protocols: Meso- And Microcosms

Автор: McGenity Terry J., Timmis Kenneth N., Nogales Balbina
Название: Hydrocarbon and Lipid Microbiology Protocols: Meso- And Microcosms
ISBN: 3662571129 ISBN-13(EAN): 9783662571125
Издательство: Springer
Рейтинг:
Цена: 93160.00 T
Наличие на складе: Есть у поставщика Поставка под заказ.
Описание: < Hydrocarbon and Lipid Microbiology ProtocolsThere are tens of thousands of structurally different hydrocarbons, hydrocarbon derivatives and lipids, and a wide array of these molecules are required for cells to function.

Hydrocarbon and Lipid Microbiology Protocols: Primers

Автор: McGenity Terry J., Timmis Kenneth N., Nogales Balbina
Название: Hydrocarbon and Lipid Microbiology Protocols: Primers
ISBN: 3662570572 ISBN-13(EAN): 9783662570579
Издательство: Springer
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Цена: 93160.00 T
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Описание: Introduction.- Current landscape of biomolecular approaches for assessing biodegradation of aromatic hydrocarbons.- Primers - bacterial genes encoding enzymes for aerobic alkane degradation.- Primers - functional genes for anaerobic hydrocarbon degrading microbes.- Primers - functional marker genes for methylotrophs and methanotrophs.- Primers - functional genes and 16S rRNA genes for methanogens.- Primers - functional genes for aerobic chlorinated hydrocarbon degrading microbes.- Primers that target functional genes of organohalide-respiring bacteria.- Primers - functional genes for nitrogen-cycling microbes in oil reservoirs.

Hydrocarbon and Lipid Microbiology Protocols: Microbial Quantitation, Community Profiling and Array Approaches

Автор: McGenity Terry J., Timmis Kenneth N., Nogales Balbina
Название: Hydrocarbon and Lipid Microbiology Protocols: Microbial Quantitation, Community Profiling and Array Approaches
ISBN: 3662570815 ISBN-13(EAN): 9783662570814
Издательство: Springer
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Описание: Introduction to Microbial Quantitation, Community Profiling, and Array Approaches.- A cell extraction method for oily sediments.- Introduction to microplate MPN-enumeration of hydrocarbon degraders.- Primers for dsr genes and Most Probable Number Method for detection of sulfate-reducing bacteria in oil reservoirs.- Microbial biomass and community analysis by PLFA analysis.- Real-time PCR approaches for analysis of hydrocarbon-degrading bacterial communities.- Clone libraries of ribosomal RNA gene sequences for characterization of microbial communities.- Denaturing gradient gel electrophoresis (DGGE) for microbial community analysis.- Microbial community profiling: SSCP and T-RFLP techniques.- Microbial community analysis by single-amplicon high-throughput sequencing (metagenetics) - preparation, data handling and ecological analysis.- Multiplex fluorescent antibody microarrays and antibody graphs for microbial and biomarker detection in the environment.- Studying protistan communities in hydrocarbon-contaminated environments.


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