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High-Performance Algorithms for Mass Spectrometry-Based Omics, Saeed


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Цена: 93160.00T
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Автор: Saeed
Название:  High-Performance Algorithms for Mass Spectrometry-Based Omics
ISBN: 9783031019593
Издательство: Springer
Классификация:



ISBN-10: 3031019598
Обложка/Формат: Hardback
Страницы: 140
Вес: 0.44 кг.
Дата издания: 17.09.2022
Серия: Computational Biology
Язык: English
Издание: 1st ed. 2022
Иллюстрации: 49 illustrations, color; 4 illustrations, black and white; xvi, 140 p. 53 illus., 49 illus. in color.
Размер: 235 x 155
Читательская аудитория: Professional & vocational
Основная тема: Life Sciences
Ссылка на Издательство: Link
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Поставляется из: Германии
Описание: To date, processing of high-throughput Mass Spectrometry (MS) data is accomplished using serial algorithms. Developing new methods to process MS data is an active area of research but there is no single strategy that focuses on scalability of MS based methods. Mass spectrometry is a diverse and versatile technology for high-throughput functional characterization of proteins, small molecules and metabolites in complex biological mixtures. In the recent years the technology has rapidly evolved and is now capable of generating increasingly large (multiple tera-bytes per experiment) and complex (multiple species/microbiome/high-dimensional) data sets. This rapid advance in MS instrumentation must be matched by equally fast and rapid evolution of scalable methods developed for analysis of these complex data sets. Ideally, the new methods should leverage the rich heterogeneous computational resources available in a ubiquitous fashion in the form of multicore, manycore, CPU-GPU, CPU-FPGA, and IntelPhi architectures. The absence of these high-performance computing algorithms now hinders scientific advancements for mass spectrometry research. In this book we illustrate the need for high-performance computing algorithms for MS based proteomics, and proteogenomics and showcase our progress in developing these high-performance algorithms.
Дополнительное описание: 1. Need for High Performance Computing for Big MS Data.- 2. Introduction to Mass Spectrometry Data.- 3. A Review of Spectral Pre-processing.- 4. MS-REDUCE: An Ultra Data Reduction Algorithm.- 5. GPU-DAEMON: A Template to Support Development of GPU Algorit


Protein Function Prediction for Omics Era

Автор: Daisuke Kihara
Название: Protein Function Prediction for Omics Era
ISBN: 9400799640 ISBN-13(EAN): 9789400799646
Издательство: Springer
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Цена: 191550.00 T
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Описание: This book examines the emerging development of computational gene function prediction methods, which are targeted to analyze large scale data, and also those which use such omics data as additional source of function prediction.

MALDI Mass Spectrometry Imaging: From Fundamentals to Spatial Omics

Автор: Tiffany Porta Siegel
Название: MALDI Mass Spectrometry Imaging: From Fundamentals to Spatial Omics
ISBN: 1839162414 ISBN-13(EAN): 9781839162411
Издательство: Royal Society of Chemistry
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Цена: 252030.00 T
Наличие на складе: Нет в наличии.
Описание: This book gathers knowledge about matrix-assisted laser desorption ionisation (MALDI) mass spectrometry imaging for postgraduate and professional researchers in academia and in industry where it has direct application to clinical research.

High Performance Liquid Chromatography

Автор: Al Sayed Omar Khalifa Omar Moustafa a.
Название: High Performance Liquid Chromatography
ISBN: 3110528800 ISBN-13(EAN): 9783110528800
Издательство: Walter de Gruyter
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Цена: 153570.00 T
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Описание:

During the past decade, modern high-performance liquid chromatography (HPLC) utilization has expanded greatly, especially in the quality control of pharmaceutical products in drug quality control laboratories. This book provides an extensive collection of technical information about HPLC-Columns (physicochemical properties and chromatographic characteristics), from various manufacturers, and helps analysts to decide on the ideal approach for their analysis according to the requirements of drug manufacturers specifi cations and the desired Pharmacopeia. In addition, the authors give practical advice on how to prepare mobile phases, choose a suitable detector, and set up an HPLC analysis. This book is comprehensive for the average professional or technician who plans to work with modern HPLC. This book is useful for most Drug Quality Control Laboratories where modern HPLC is utilized. Following a hands-on approach, the book gives key insights into the pharmaceutical applications of HPLC and the latest requirements of the major regulatory agencies such as ICH, FDA, or USP.


OMICS

Название: OMICS
ISBN: 1138074756 ISBN-13(EAN): 9781138074750
Издательство: Taylor&Francis
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Цена: 83690.00 T
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Описание:

With the advent of new technologies and acquired knowledge, the number of fields in omics and their applications in diverse areas are rapidly increasing in the postgenomics era. Such emerging fields--including pharmacogenomics, toxicogenomics, regulomics, spliceomics, metagenomics, and environomics--present budding solutions to combat global challenges in biomedicine, agriculture, and the environment. OMICS: Applications in Biomedical, Agricultural, and Environmental Sciences provides valuable insights into the applications of modern omics technologies to real-world problems in the life sciences. Filling a gap in the literature, it offers a broad, multidisciplinary view of current and emerging applications of omics in a single volume.

Written by highly experienced active researchers, each chapter describes a particular area of omics and the associated technologies and applications. Topics covered include:

  • Proteomics, epigenomics, and pharmacogenomics
  • Toxicogenomics and the assessment of environmental pollutants
  • Applications of plant metabolomics
  • Nutrigenomics and its therapeutic applications
  • Microalgal omics and omics approaches in biofuel production
  • Next-generation sequencing and omics technology for transgenic plant analysis
  • Omics approaches in crop improvement
  • Engineering dark-operative chlorophyll synthesis
  • Computational regulomics
  • Omics techniques for the analysis of RNA splicing
  • New fields, including metagenomics, glycomics, and miRNA
  • Breast cancer biomarkers for early detection
  • Environomics strategies for environmental sustainability

This timely book explores a wide range of omics application areas in the biomedical, agricultural, and environmental sciences. Throughout, it highlights working solutions as well as open problems and future challenges. Demonstrating the diversity of omics, it introduces readers to state-of-the-art developments and trends in omics-driven research.


Methodologies of Multi-Omics Data Integration and Data Mining

Автор: Ning
Название: Methodologies of Multi-Omics Data Integration and Data Mining
ISBN: 9811982090 ISBN-13(EAN): 9789811982095
Издательство: Springer
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Цена: 158380.00 T
Наличие на складе: Есть у поставщика Поставка под заказ.
Описание: This book features multi-omics big-data integration and data-mining techniques. In the omics age, paramount of multi-omics data from various sources is the new challenge we are facing, but it also provides clues for several biomedical or clinical applications. This book focuses on data integration and data mining methods for multi-omics research, which explains in detail and with supportive examples the “What”, “Why” and “How” of the topic. The contents are organized into eight chapters, out of which one is for the introduction, followed by four chapters dedicated for omics integration techniques focusing on several omics data resources and data-mining methods, and three chapters dedicated for applications of multi-omics analyses with application being demonstrated by several data mining methods. This book is an attempt to bridge the gap between the biomedical multi-omics big data and the data-mining techniques for the best practice of contemporary bioinformatics and the in-depth insights for the biomedical questions. It would be of interests for the researchers and practitioners who want to conduct the multi-omics studies in cancer, inflammation disease, and microbiome researches.

Omics for Environmental Engineering and Microbiology Systems

Автор: Kumar, Vineet
Название: Omics for Environmental Engineering and Microbiology Systems
ISBN: 103216283X ISBN-13(EAN): 9781032162836
Издательство: Taylor&Francis
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Цена: 188850.00 T
Наличие на складе: Есть у поставщика Поставка под заказ.

Microbial Biofilms

Автор: Seneviratne, Chaminda Jay
Название: Microbial Biofilms
ISBN: 0367657996 ISBN-13(EAN): 9780367657994
Издательство: Taylor&Francis
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Цена: 48990.00 T
Наличие на складе: Нет в наличии.

Omics Technologies and Bio-engineering

Автор: Barh, Debmalya
Название: Omics Technologies and Bio-engineering
ISBN: 0128158700 ISBN-13(EAN): 9780128158708
Издательство: Elsevier Science
Рейтинг:
Цена: 110030.00 T
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Описание: Omics Technologies and Bio-Engineering: Towards Improving Quality of Life, Volume 2 is a unique reference that brings together multiple perspectives on omics research, providing in-depth analysis and insights from an international team of authors. The book delivers pivotal information that will inform and improve medical and biological research by helping readers gain more direct access to analytic data, an increased understanding on data evaluation, and a comprehensive picture on how to use omics data in molecular biology, biotechnology and human health care.

Omics in Clinical Practice

Название: Omics in Clinical Practice
ISBN: 1771880600 ISBN-13(EAN): 9781771880602
Издательство: Taylor&Francis
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Цена: 137810.00 T
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Описание:

This title includes a number of Open Access chapters.

This book serves as an introduction to genomics, proteomics, and transcriptomics, putting these fields in relation to human disease and ailments. The various chapters consider the role of translation and personalized medicine, as well as pathogen detection, evolution, and infection, in relation to genomics, proteomics, and transcriptomics. The topic of companion diagnostics is also covered.

The book is broken into five sections. Part I examines the connection between omics and human disease. Part II looks at the applications for the fields of translational and personalized medicine. Part III focuses on molecular and genetic markers. Part IV describes the use of omics while studying pathogens, and Part V examines the applications for companion diagnostics.

The book:

- Introduces genomics, proteomics, and transcriptomics in relation to human disease and ailments

- Considers the role of translation and personalized medicine in relation to genomics, proteomics, and transcriptomics

- Covers molecular and genetic markers

- Considers the role of genomics, proteomics, and transcriptomics in relation to pathogen detection, evolution, and infection

- Covers companion diagnostics in relation to genomics, proteomics, and transcriptomics clinical applications and research


Traditional Chinese Medicine and Diseases

Автор: Ning
Название: Traditional Chinese Medicine and Diseases
ISBN: 9811947708 ISBN-13(EAN): 9789811947704
Издательство: Springer
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Цена: 93160.00 T
Наличие на складе: Есть у поставщика Поставка под заказ.
Описание: This book focuses on the multi-omics big-data integration, the data-mining techniques and the cutting-edge omics researches in principles and applications for a deep understanding of Traditional Chinese Medicine (TCM) and diseases from the following aspects: (1) Basics about multi-omics data and analytical methods for TCM and diseases. (2) The needs of omics studies in TCM researches, and the basic background of omics research in TCM and disease. (3) Better understanding of the multi-omics big-data integration techniques. (4) Better understanding of the multi-omics big-data mining techniques, as well as with different applications, for most insights from these omics data for TCM and disease researches. (5) TCM preparation quality control for checking both prescribed and unexpected ingredients including biological and chemical ingredients. (6) TCM preparation source tracking. (7) TCM preparation network pharmacology analysis. (8) TCM analysis data resources, web services, and visualizations. (9) TCM geoherbalism examination and authentic TCM identification. Traditional Chinese Medicine has been in existence for several thousands of years, and only in recent tens of years have we realized that the researches on TCM could be profoundly boosted by the omics technologies. Devised as a book on TCM and disease researches in the omics age, this book has put the focus on data integration and data mining methods for multi-omics researches, which will be explained in detail and with supportive examples the “What”, “Why” and “How” of omics on TCM related researches. It is an attempt to bridge the gap between TCM related multi-omics big data, and the data-mining techniques, for best practice of contemporary bioinformatics and in-depth insights on the TCM related questions.

Bioinformatics for Omics Data

Автор: Bernd Mayer
Название: Bioinformatics for Omics Data
ISBN: 1493957805 ISBN-13(EAN): 9781493957804
Издательство: Springer
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Цена: 167700.00 T
Наличие на складе: Есть у поставщика Поставка под заказ.
Описание: Presenting an area of research that intersects with and integrates diverse disciplines, including molecular biology, applied informatics, and statistics, among others, Bioinformatics for Omics Data: Methods and Protocols collects contributions from expert researchers in order to provide practical guidelines to this complex study. Divided into three convenient sections, this detailed volume covers central analysis strategies, standardization and data-management guidelines, and fundamental statistics for analyzing Omics profiles, followed by a section on bioinformatics approaches for specific Omics tracks, spanning genome, transcriptome, proteome, and metabolome levels, as well as an assortment of examples of integrated Omics bioinformatics applications, complemented by case studies on biomarker and target identification in the context of human disease. Written in the highly successful Methods in Molecular Biology™ series format, chapters contain introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and notes on troubleshooting and avoiding known pitfalls. Authoritative and accessible, Bioinformatics for Omics Data: Methods and Protocols serves as an ideal guide to scientists of all backgrounds and aims to convey the appropriate sense of fascination associated with this research field.

Extracellular Matrix Omics

Автор: Ricard-Blum Sylvie
Название: Extracellular Matrix Omics
ISBN: 3030583325 ISBN-13(EAN): 9783030583323
Издательство: Springer
Рейтинг:
Цена: 149060.00 T
Наличие на складе: Есть у поставщика Поставка под заказ.
Описание: This book covers different omics aspects related to the extracellular matrix (ECM), namely specific omics resources focused on the extracellular matrix (e.g., databases, repositories and atlases), quantitative proteomics applied to specific extracellular matrices (e.g.


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